Transcript: lnc-UNCX-3:6

Basic information

LNCipedia transcript ID: lnc-UNCX-3:6 
LNCipedia gene ID: lnc-UNCX-3
RefSeq ID: NR_110068
Location (hg19): chr7:1200010-1205594
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2048 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110068; NR_110068.1
Alternative gene names: LOC101927021


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.4833 non-coding 
CPAT coding probability 7.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UNCX-3:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPER-3:9
4.0 lnc-UNCX-3:6
4.1 lnc-UNCX-3:6
5.0 lnc-UNCX-3:6
5.1 lnc-GPER1-8:7
5.2 lnc-UNCX-3:6