Transcript: lnc-UPP2-2:5

Basic information

LNCipedia transcript ID: lnc-UPP2-2:5 
LNCipedia gene ID: lnc-UPP2-2
Location (hg19): chr2:158732944-158735067
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1519 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270557.1|MICT00000201535.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.692 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UPP2-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UPP2-2:5
5.0 lnc-UPP2-2:5
5.1 lnc-UPP2-2:5
5.2 lnc-UPP2-2:5