Transcript: lnc-UPRT-6:8

Basic information

LNCipedia transcript ID: lnc-UPRT-6:8 
LNCipedia gene ID: lnc-UPRT-6
Location (hg19): chrX:74743378-75011621
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 646 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000111634.1|FTMT29100023904.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.238 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UPRT-6:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UPRT-6:8
5.0 lnc-UPRT-6:8
5.1 lnc-NHSL2-40:8
5.2 lnc-UPRT-6:8