Transcript: lnc-UQCRFS1-5:1

Basic information

LNCipedia transcript ID: lnc-UQCRFS1-5:1 
LNCipedia gene ID: lnc-UQCRFS1-5
Location (hg19): chr19:28479862-28491271
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1012 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027283; NONHSAT064028
Alternative gene names: XLOC_013285; linc-ZNF681-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.3426 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UQCRFS1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UQCRFS1-4:1
3.1 lnc-UQCRFS1-5:1
4.0 lnc-UQCRFS1-5:1
4.1 lnc-UQCRFS1-5:1
5.0 lnc-UQCRFS1-5:1
5.1 lnc-SCGB2B2-124:1
5.2 lnc-UQCRFS1-5:1