Transcript: lnc-USP12-9:11

Basic information

LNCipedia transcript ID: lnc-USP12-9:11 
LNCipedia gene ID: lnc-USP12-9
Location (hg19): chr13:27781432-27782326
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 786 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022238; NONHSAT032638
Alternative gene names: XLOC_010542; linc-USP12-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.0083 non-coding 
CPAT coding probability 22.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP12-9:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP12-3:1
3.1 lnc-USP12-3:2
4.0 lnc-USP12-3:2
4.1 LINC00412:11
5.0 LINC00412:11
5.1 lnc-SLC7A1-26:11
5.2 lnc-USP12-9:11