Transcript: lnc-USP12-9:5

Basic information

LNCipedia transcript ID: lnc-USP12-9:5 
LNCipedia gene ID: lnc-USP12-9
Location (hg19): chr13:27775175-27825397
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 611 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000016591.1|HBMT00000391590.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.3919 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP12-9:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00412:7
5.0 LINC00412:7
5.1 lnc-SLC7A1-26:5
5.2 lnc-USP12-9:5