Transcript: lnc-USP13-7:4

Basic information

LNCipedia transcript ID: lnc-USP13-7:4 
LNCipedia gene ID: lnc-USP13-7
Location (hg19): chr3:179687558-179829330
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 416 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000062986.1|FTMT21100052713.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -250.1514 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP13-7:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-USP13-7:4
5.0 lnc-USP13-7:4
5.1 lnc-ACTL6A-10:4
5.2 lnc-USP13-7:4