Transcript: lnc-USP17L8-2:1

Basic information

LNCipedia transcript ID: lnc-USP17L8-2:1 
LNCipedia gene ID: lnc-USP17L8-2
Location (hg19): chr8:7791934-7796292
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 222 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT124839
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 102.5545 coding 
CPAT coding probability 8.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP17L8-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DEFB105A-2:1
4.0 lnc-DEFB105A-2:1
4.1 lnc-DEFB105A-2:1
5.0 lnc-DEFB105A-2:1
5.1 lnc-DEFA1B-25:1
5.2 lnc-USP17L8-2:1