Transcript: lnc-USP35-15:2

Basic information

LNCipedia transcript ID: lnc-USP35-15:2 
LNCipedia gene ID: lnc-USP35-15
Location (hg19): chr11:78286015-78286492
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 478 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000003024.1|FTMT24400003567.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.3172 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP35-15:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-USP35-15:2
5.0 lnc-USP35-15:2
5.1 lnc-DDIAS-41:1
5.2 lnc-USP35-15:2