Transcript: lnc-USP45-2:4

Basic information

LNCipedia transcript ID: lnc-USP45-2:4 
LNCipedia gene ID: lnc-USP45-2
Location (hg19): chr6:99859667-99873134
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2850 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT114118
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 751.0711 coding 
CPAT coding probability 13.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP45-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COQ3-2:3
4.0 lnc-USP45-2:4
4.1 lnc-USP45-2:4
5.0 lnc-USP45-2:4
5.1 lnc-SNX3-65:3
5.2 lnc-USP45-2:4