Transcript: lnc-USP53-3:2

Basic information

LNCipedia transcript ID: lnc-USP53-3:2 
LNCipedia gene ID: lnc-USP53-3
Location (hg19): chr4:120330489-120331408
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 920 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT098058
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.3229 non-coding 
CPAT coding probability 6.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP53-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC110373.1-2:2
4.0 lnc-AC110373.1-2:2
4.1 lnc-AC110373.1-2:2
5.0 lnc-AC110373.1-2:2
5.1 lnc-EXOSC9-24:2
5.2 lnc-USP53-3:2