Transcript: lnc-USP6NL-10:4

Basic information

LNCipedia transcript ID: lnc-USP6NL-10:4 
LNCipedia gene ID: lnc-USP6NL-10
Location (hg19): chr10:9832482-9845549
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 307 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018429; NONHSAT011346
Alternative gene names: XLOC_008727; linc-KIN-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -223.9122 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP6NL-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf31-6:4
3.1 lnc-C10orf31-10:4
4.0 lnc-C10orf31-10:4
4.1 lnc-C10orf31-10:4
5.0 lnc-C10orf31-10:4
5.1 lnc-KLF6-126:4
5.2 lnc-USP6NL-10:4