Transcript: lnc-USP6NL-8:4

Basic information

LNCipedia transcript ID: lnc-USP6NL-8:4 
LNCipedia gene ID: lnc-USP6NL-8
Location (hg19): chr10:10461500-10504510
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 596 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00018433
Alternative gene names: XLOC_008729; linc-KIN-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.8896 non-coding 
CPAT coding probability 14.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP6NL-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf31-4:2
3.1 lnc-C10orf31-8:2
4.0 lnc-C10orf31-8:2
4.1 lnc-C10orf31-8:2
5.0 lnc-C10orf31-8:2
5.1 lnc-KLF6-130:4
5.2 lnc-USP6NL-8:4