Transcript: lnc-USP9Y-2:1

Basic information

LNCipedia transcript ID: lnc-USP9Y-2:1 
LNCipedia gene ID: lnc-USP9Y-2
Location (hg19): chrY:14465804-14468226
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 499 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000430152.1; AC002992.4-001; OTTHUMT00000088553.1; NONHSAT139475
Alternative gene names: ENSG00000239204.1; AC002992.4; OTTHUMG00000036381.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 187.4004 coding 
CPAT coding probability 3.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP9Y-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP9Y-2:1
4.0 lnc-USP9Y-2:1
4.1 lnc-USP9Y-2:1
5.0 lnc-USP9Y-2:1
5.1 lnc-TGIF2LY-65:2
5.2 lnc-USP9Y-2:1