Transcript: lnc-USPL1-2:9

Basic information

LNCipedia transcript ID: lnc-USPL1-2:9 
LNCipedia gene ID: lnc-USPL1-2
Location (hg19): chr13:31289034-31291069
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2036 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014213.1|FTMT25200000818.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.0782 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USPL1-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALOX5AP-2:1
5.0 lnc-ALOX5AP-2:1
5.1 lnc-PDS5B-21:1
5.2 lnc-USPL1-2:9