Transcript: lnc-UTP11-2:1

Basic information

LNCipedia transcript ID: lnc-UTP11-2:1 
LNCipedia gene ID: lnc-UTP11-2
Location (hg19): chr1:38607364-38628221
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT002503; FPKM1_group_419_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.2002 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UTP11-2:1 no no no no

Available literature

  1. Ding (2015), Genetics of RA susceptibility, what comes next?, RMD Open


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UTP11L-2:3
4.0 lnc-UTP11L-2:3
4.1 lnc-UTP11L-2:3
5.0 lnc-UTP11L-2:3
5.1 lnc-PPIE-44:1
5.2 lnc-UTP11-2:1