Transcript: lnc-UTP11-3:2

Basic information

LNCipedia transcript ID: lnc-UTP11-3:2 
LNCipedia gene ID: lnc-UTP11-3
Location (hg19): chr1:38658716-38676024
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 591 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000895; NONHSAT002506
Alternative gene names: XLOC_000148; linc-AKIRIN1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -264.8033 non-coding 
CPAT coding probability 12.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UTP11-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UTP11L-2:1
3.1 lnc-UTP11L-3:1
4.0 lnc-UTP11L-3:1
4.1 lnc-UTP11L-3:1
5.0 lnc-UTP11L-3:1
5.1 lnc-PPIE-45:2
5.2 lnc-UTP11-3:2