Transcript: lnc-UTS2-5:8

Basic information

LNCipedia transcript ID: lnc-UTS2-5:8 
LNCipedia gene ID: lnc-UTS2-5
Location (hg19): chr1:7761705-7764051
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1693 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1500:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.5885 non-coding 
CPAT coding probability 25.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UTS2-5:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-UTS2-5:8
4.1 lnc-UTS2-5:8
5.0 lnc-UTS2-5:8
5.1 lnc-CLSTN1-34:3
5.2 lnc-UTS2-5:8