Transcript: lnc-UVSSA-1:8

Basic information

LNCipedia transcript ID: lnc-UVSSA-1:8 
LNCipedia gene ID: lnc-UVSSA-1
Location (hg19): chr4:1552973-1553887
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 841 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008740; NONHSAT094721
Alternative gene names: XLOC_003422; linc-TACC3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.6171 non-coding 
CPAT coding probability 8.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UVSSA-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CRIPAK-1:7
3.1 lnc-CRIPAK-1:7
4.0 lnc-CRIPAK-1:7
4.1 lnc-CRIPAK-1:7
5.0 lnc-CRIPAK-1:7
5.1 lnc-GPR78-106:8
5.2 lnc-UVSSA-1:8