Transcript: lnc-VAMP2-5:2

Basic information

LNCipedia transcript ID: lnc-VAMP2-5:2 
LNCipedia gene ID: lnc-VAMP2-5
Location (hg19): chr17:8077489-8079705
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 830 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT145492
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 849.5817 coding 
CPAT coding probability 42.84% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VAMP2-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VAMP2-5:2
4.0 lnc-VAMP2-5:2
4.1 lnc-VAMP2-5:2
5.0 lnc-VAMP2-5:2
5.1 lnc-PIK3R5-20:2
5.2 lnc-VAMP2-5:2