Transcript: lnc-VCL-2:1

Basic information

LNCipedia transcript ID: lnc-VCL-2:1 
LNCipedia gene ID: lnc-VCL-2
Location (hg19): chr10:75880800-75881121
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 322 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT014050; ENST00000599110.1
Alternative gene names: ENSG00000269772.1; RP11-178G16.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -281.2689 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VCL-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VCL-2:1
4.0 lnc-VCL-2:1
4.1 lnc-VCL-2:1
5.0 lnc-VCL-2:1
5.1 lnc-MTRNR2L5-183:1
5.2 lnc-VCL-2:1