Transcript: lnc-VEPH1-2:5

Basic information

LNCipedia transcript ID: lnc-VEPH1-2:5 
LNCipedia gene ID: lnc-VEPH1-2
Location (hg19): chr3:156865585-156871617
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4799 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT092890
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4103.8064 coding 
CPAT coding probability 99.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VEPH1-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VEPH1-2:5
4.0 lnc-VEPH1-2:5
4.1 lnc-VEPH1-2:5
5.0 lnc-VEPH1-2:5
5.1 lnc-SHOX2-22:5
5.2 lnc-VEPH1-2:5