Transcript: lnc-VEPH1-2:8

Basic information

LNCipedia transcript ID: lnc-VEPH1-2:8 
LNCipedia gene ID: lnc-VEPH1-2
Location (hg19): chr3:156867233-156869999
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 534 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT092894
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1734.9536 coding 
CPAT coding probability 71.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VEPH1-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VEPH1-2:8
4.0 lnc-VEPH1-2:8
4.1 lnc-VEPH1-2:8
5.0 lnc-VEPH1-2:8
5.1 lnc-SHOX2-22:8
5.2 lnc-VEPH1-2:8