Transcript: lnc-VGLL4-4:3

Basic information

LNCipedia transcript ID: lnc-VGLL4-4:3 
LNCipedia gene ID: lnc-VGLL4-4
Location (hg19): chr3:11831922-11853033
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2768 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT087989
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 288.5892 coding 
CPAT coding probability 2.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VGLL4-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VGLL4-4:3
4.0 lnc-VGLL4-4:3
4.1 lnc-VGLL4-4:3
5.0 lnc-VGLL4-4:3
5.1 lnc-TIMP4-10:1
5.2 lnc-VGLL4-4:3