Transcript: lnc-VGLL4-6:4

Basic information

LNCipedia transcript ID: lnc-VGLL4-6:4 
LNCipedia gene ID: lnc-VGLL4-6
Location (hg19): chr3:11187209-11196121
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2720 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000063733.1|MICT00000238014.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.3077 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VGLL4-6:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VGLL4-6:4
5.0 lnc-VGLL4-6:4
5.1 lnc-SEC13-6:3
5.2 lnc-VGLL4-6:4