Transcript: lnc-VIRMA-1:11

Basic information

LNCipedia transcript ID: lnc-VIRMA-1:11 
LNCipedia gene ID: lnc-VIRMA-1
Location (hg19): chr8:95649513-95651695
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2178 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT127786
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -164.0275 non-coding 
CPAT coding probability 34.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VIRMA-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1429-1:4
4.0 lnc-KIAA1429-1:4
4.1 lnc-KIAA1429-1:4
5.0 lnc-KIAA1429-1:4
5.1 lnc-ZNF706-151:11
5.2 lnc-VIRMA-1:11