Transcript: lnc-VMO1-2:3

Basic information

LNCipedia transcript ID: lnc-VMO1-2:3 
LNCipedia gene ID: lnc-VMO1-2
Location (hg19): chr17:4704454-4710304
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 558 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262165.1|ENST00000571067.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 444.5978 coding 
CPAT coding probability 3.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VMO1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VMO1-2:3
5.0 lnc-VMO1-2:3
5.1 lnc-PHF23-54:2
5.2 lnc-VMO1-2:3