Transcript: lnc-VPREB1-7:14

Basic information

LNCipedia transcript ID: lnc-VPREB1-7:14 
LNCipedia gene ID: lnc-VPREB1-7
Location (hg19): chr22:22657488-22664258
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3408 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA910:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 39.1615 non-coding 
CPAT coding probability 8.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VPREB1-7:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-VPREB1-7:14
4.1 lnc-VPREB1-7:14
5.0 lnc-VPREB1-7:14
5.1 lnc-LRRC74B-48:3
5.2 lnc-VPREB1-7:14