Transcript: lnc-VPS41-5:1

Basic information

LNCipedia transcript ID: lnc-VPS41-5:1 
LNCipedia gene ID: lnc-VPS41-5
Location (hg19): chr7:38570642-38570939
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 298 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT120188
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.6287 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VPS41-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM183B-5:1
4.0 lnc-FAM183B-5:1
4.1 lnc-FAM183B-5:1
5.0 lnc-FAM183B-5:1
5.1 lnc-SFRP4-14:1
5.2 lnc-VPS41-5:1