Transcript: lnc-VRK1-10:4

Basic information

LNCipedia transcript ID: lnc-VRK1-10:4 
LNCipedia gene ID: lnc-VRK1-10
Location (hg19): chr14:98172472-98211934
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1156 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000020091.1|ENCT00000129672.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.8331 non-coding 
CPAT coding probability 4.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VRK1-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VRK1-10:4
5.0 lnc-VRK1-10:4
5.1 lnc-CCNK-13:4
5.2 lnc-VRK1-10:4