Transcript: lnc-VSIG8-2:6

Basic information

LNCipedia transcript ID: lnc-VSIG8-2:6 
LNCipedia gene ID: lnc-VSIG8-2
Location (hg19): chr1:159795012-159796354
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1343 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000079334.1|FTMT20200007505.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.7603 non-coding 
CPAT coding probability 3.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSIG8-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf204-2:6
5.0 lnc-C1orf204-2:6
5.1 lnc-TAGLN2-5:5
5.2 lnc-VSIG8-2:6