Transcript: lnc-VSTM2B-5:5

Basic information

LNCipedia transcript ID: lnc-VSTM2B-5:5 
LNCipedia gene ID: lnc-VSTM2B-5
Location (hg19): chr19:29704177-29706644
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 622 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT064092
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.1987 non-coding 
CPAT coding probability 7.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSTM2B-5:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VSTM2B-5:5
4.0 lnc-VSTM2B-5:5
4.1 lnc-VSTM2B-5:5
5.0 lnc-VSTM2B-5:5
5.1 lnc-GPI-71:13
5.2 lnc-VSTM2B-5:5