Transcript: lnc-VWA5B1-22:1

Basic information

LNCipedia transcript ID: lnc-VWA5B1-22:1 
LNCipedia gene ID: lnc-VWA5B1-22
Ensembl Gene ID: ENSG00000284710
Ensembl Transcript ID: ENST00000641574
Location (hg19): chr1:20598511-20600092
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 831 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641574.1
Alternative gene names: ENSG00000284710.1; Z98257.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -125.5314 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VWA5B1-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NBPF3-22:1
5.1 lnc-NBPF3-22:1
5.2 lnc-VWA5B1-22:1