Transcript: lnc-VWA8-9:2

Basic information

LNCipedia transcript ID: lnc-VWA8-9:2 
LNCipedia gene ID: lnc-VWA8-9
Location (hg19): chr13:42609412-42614554
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5143 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000016926.1|ENCT00000118336.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.4752 non-coding 
CPAT coding probability 9.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VWA8-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIAA0564-9:2
5.0 lnc-KIAA0564-9:2
5.1 lnc-CCDC169-74:2
5.2 lnc-VWA8-9:2