Transcript: lnc-VWC2L-1:14

Basic information

LNCipedia transcript ID: lnc-VWC2L-1:14 
LNCipedia gene ID: lnc-VWC2L-1
Location (hg19): chr2:215674953-215827998
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1909 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229267.2|ENST00000607412.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.2083 non-coding 
CPAT coding probability 2.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VWC2L-1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VWC2L-1:14
5.0 lnc-VWC2L-1:14
5.1 lnc-TMEM169-42:11
5.2 lnc-VWC2L-1:14