Transcript: lnc-VWC2L-3:2

Basic information

LNCipedia transcript ID: lnc-VWC2L-3:2 
LNCipedia gene ID: lnc-VWC2L-3
Location (hg19): chr2:215562459-215562788
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT076727
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.1662 non-coding 
CPAT coding probability 59.07% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VWC2L-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VWC2L-3:2
4.0 lnc-VWC2L-3:2
4.1 lnc-VWC2L-3:2
5.0 lnc-VWC2L-3:2
5.1 lnc-TMEM169-43:2
5.2 lnc-VWC2L-3:2