Transcript: lnc-WDPCP-1:16

Basic information

LNCipedia transcript ID: lnc-WDPCP-1:16 
LNCipedia gene ID: lnc-WDPCP-1
Location (hg19): chr2:63270554-63273701
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2808 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231609.1|HBMT00000805914.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.744 non-coding 
CPAT coding probability 40.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-WDPCP-1:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-WDPCP-1:16
5.0 lnc-WDPCP-1:16
5.1 lnc-GKN2-173:17
5.2 lnc-WDPCP-1:16