Transcript: lnc-WDR26-1:19

Basic information

LNCipedia transcript ID: lnc-WDR26-1:19 
LNCipedia gene ID: lnc-WDR26-1
Ensembl Gene ID: ENSG00000233384
Ensembl Transcript ID: ENST00000437416
Location (hg19): chr1:224799106-224803922
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 684 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437416.2
Alternative gene names: ENSG00000233384.2; AC096537.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -255.5682 non-coding 
CPAT coding probability 9.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDR26-1:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LEFTY2-24:11
5.1 lnc-LEFTY2-24:11
5.2 lnc-WDR26-1:19