Transcript: lnc-WDR3-1:1

Basic information

LNCipedia transcript ID: lnc-WDR3-1:1 
LNCipedia gene ID: lnc-WDR3-1
Location (hg19): chr1:118406111-118411617
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5427 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000500821; NONHSAT005502
Alternative gene names: ENSG00000246170; AL122007.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.0887 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDR3-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR3-1:1
3.1 lnc-WDR3-1:1
4.0 lnc-WDR3-1:1
4.1 lnc-WDR3-1:1
5.0 lnc-WDR3-1:1
5.1 lnc-WDR3-1:1
5.2 lnc-WDR3-1:1