Transcript: lnc-WDR34-2:3

Basic information

LNCipedia transcript ID: lnc-WDR34-2:3 
LNCipedia gene ID: lnc-WDR34-2
Location (hg19): chr9:131299690-131314032
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5686 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_3862_chr9:131299689-131310223_adrenal
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.3456 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDR34-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR34-2:3
4.0 lnc-WDR34-2:3
4.1 lnc-WDR34-2:3
5.0 lnc-WDR34-2:3
5.1 lnc-SPOUT1-9:2
5.2 lnc-WDR34-2:3