Transcript: lnc-WDR7-3:1

Basic information

LNCipedia transcript ID: lnc-WDR7-3:1 
LNCipedia gene ID: lnc-WDR7-3
Location (hg19): chr18:54712815-54716542
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1558 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026340; NONHSAT059434
Alternative gene names: XLOC_012690; linc-ST8SIA3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.0579 non-coding 
CPAT coding probability 91.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-WDR7-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR7-3:1
3.1 lnc-WDR7-3:1
4.0 lnc-WDR7-3:1
4.1 lnc-WDR7-3:1
5.0 lnc-WDR7-3:1
5.1 lnc-WDR7-3:1
5.2 lnc-WDR7-3:1