Transcript: lnc-WDR73-2:1

Basic information

LNCipedia transcript ID: lnc-WDR73-2:1 
LNCipedia gene ID: lnc-WDR73-2
Ensembl Gene ID: ENSG00000256278
Ensembl Transcript ID: ENST00000542197
Location (hg19): chr15:85154920-85158200
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1018 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000542197.1; RP11-182J1.5-001; OTTHUMT00000396965.1; NONHSAT047987
Alternative gene names: ENSG00000256278.1; RP11-182J1.5; OTTHUMG00000167913.1; AC048382.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.1856 non-coding 
CPAT coding probability 21.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDR73-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR73-2:1
4.0 lnc-WDR73-2:1
4.1 lnc-WDR73-2:1
5.0 lnc-WDR73-2:1
5.1 lnc-NMB-2:1
5.2 lnc-WDR73-2:1