Transcript: lnc-WNT1-3:1

Basic information

LNCipedia transcript ID: lnc-WNT1-3:1 
LNCipedia gene ID: lnc-WNT1-3
Location (hg19): chr12:49455911-49457826
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 811 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020413; NONHSAT028068
Alternative gene names: XLOC_009740; linc-TUBA1C-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.9265 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WNT1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WNT1-2:1
3.1 lnc-WNT1-3:1
4.0 lnc-WNT1-3:1
4.1 lnc-WNT1-3:1
5.0 lnc-WNT1-3:1
5.1 lnc-PRPH-10:2
5.2 lnc-WNT1-3:1