Transcript: lnc-WRAP73-2:1

Basic information

LNCipedia transcript ID: lnc-WRAP73-2:1 
LNCipedia gene ID: lnc-WRAP73-2
Ensembl Gene ID: ENSG00000227589
Ensembl Transcript ID: ENST00000443034
Location (hg19): chr1:3575502-3585336
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 754 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000443034.1; RP5-1092A11.5-001; OTTHUMT00000099597.1; NONHSAT000526
Alternative gene names: ENSG00000227589.1; RP5-1092A11.5; OTTHUMG00000041605.1; AL136528.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.1073 non-coding 
CPAT coding probability 1.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WRAP73-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WRAP73-2:1
4.0 lnc-WRAP73-2:1
4.1 lnc-WRAP73-2:1
5.0 lnc-WRAP73-2:1
5.1 lnc-CLSTN1-80:1
5.2 lnc-WRAP73-2:1