Transcript: lnc-WRB-2:11

Basic information

LNCipedia transcript ID: lnc-WRB-2:11 
LNCipedia gene ID: lnc-WRB-2
Location (hg19): chr21:40685833-40702088
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1461 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000238141.2|HBMT00000920955.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -41.1282 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WRB-2:11 yes no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-WRB-2:11
5.0 lnc-WRB-2:11
5.1 lnc-SIM2-66:9
5.2 lnc-WRB-2:11