Transcript: lnc-WRB-2:2

Basic information

LNCipedia transcript ID: lnc-WRB-2:2 
LNCipedia gene ID: lnc-WRB-2
Location (hg19): chr21:40685817-40695172
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 885 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00029216
Alternative gene names: XLOC_013942; linc-WRB-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.0808 non-coding 
CPAT coding probability 9.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WRB-2:2 yes no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WRB-2:2
3.1 lnc-WRB-2:2
4.0 lnc-WRB-2:2
4.1 lnc-WRB-2:2
5.0 lnc-WRB-2:2
5.1 lnc-SIM2-66:2
5.2 lnc-WRB-2:2