Transcript: lnc-WRNIP1-39:1

Basic information

LNCipedia transcript ID: lnc-WRNIP1-39:1 
LNCipedia gene ID: lnc-WRNIP1-39
Location (hg19): chr6:2191031-2229007
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2287 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003mts_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.6161 non-coding 
CPAT coding probability 13.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WRNIP1-39:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WRNIP1-39:1
4.0 lnc-WRNIP1-39:1
4.1 lnc-WRNIP1-39:1
5.0 lnc-WRNIP1-39:1
5.1 lnc-RIPK1-82:1
5.2 lnc-WRNIP1-39:1