Transcript: lnc-XKR5-10:2

Basic information

LNCipedia transcript ID: lnc-XKR5-10:2 
LNCipedia gene ID: lnc-XKR5-10
Location (hg19): chr8:6560412-6563627
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3216 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT124784
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.5299 non-coding 
CPAT coding probability 3.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR5-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPT2-10:2
4.0 lnc-ANGPT2-10:2
4.1 lnc-ANGPT2-10:2
5.0 lnc-ANGPT2-10:2
5.1 lnc-DEFA1B-12:2
5.2 lnc-XKR5-10:2