Transcript: lnc-XKR6-18:3

Basic information

LNCipedia transcript ID: lnc-XKR6-18:3 
LNCipedia gene ID: lnc-XKR6-18
Location (hg19): chr8:11141279-11142248
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 970 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101658.1|FTMT23000000666.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -702.6704 non-coding 
CPAT coding probability 9.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR6-18:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LINC00529-3:1
5.0 lnc-LINC00529-3:1
5.1 lnc-PINX1-18:3
5.2 lnc-XKR6-18:3