Transcript: lnc-XKR6-3:4

Basic information

LNCipedia transcript ID: lnc-XKR6-3:4 
LNCipedia gene ID: lnc-XKR6-3
Location (hg19): chr8:11201277-11205009
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3733 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255020.1|ENCT00000432480.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.6643 non-coding 
CPAT coding probability 4.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR6-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AF131216.5.1-1:3
5.0 lnc-AF131216.5.1-1:3
5.1 lnc-PINX1-21:4
5.2 lnc-XKR6-3:4